Download MendeleyThe structure of a putative 4-hydroxythreonine-4-phosphate dehydrogenase from Salmonella typhimurium.
Cuff, M.E., Quartey, P., Holzle, D., Joachimiak, A.To be published.
2HI1
The structure of a putative 4-hydroxythreonine-4-phosphate dehydrogenase from Salmonella typhimurium.
- PDB DOI: https://doi.org/10.2210/pdb2HI1/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
- Expression System: Escherichia coli BL21
- Mutation(s): Yes
- Deposited: 2006-06-28 Released: 2006-07-25
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.266
- R-Value Work: 0.187
- R-Value Observed: 0.191
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 4-hydroxythreonine-4-phosphate dehydrogenase 2 | 330 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Mutation(s): 8 Gene Names: pdxA2 EC: 1.1.1.262 (PDB Primary Data), 1.1.1.408 (UniProt) |  | |
UniProt | |||||
Find proteins for P58718 (Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)) Explore P58718 Go to UniProtKB: P58718 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P58718 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.266
- R-Value Work: 0.187
- R-Value Observed: 0.191
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 77.66 | α = 90 |
| b = 92.892 | β = 90 |
| c = 101.328 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| SHELX | phasing |
| autoSHARP | phasing |
| ARP/wARP | model building |
| Coot | model building |
Entry History
Deposition Data
- Released Date: 2006-07-25 Deposition Author(s): Cuff, M.E., Quartey, P., Holzle, D., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2006-07-25
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Advisory, Source and taxonomy, Version format compliance - Version 1.3: 2024-10-09
Changes: Data collection, Database references, Derived calculations, Structure summary
