Download MendeleyX-ray crystal structure of glucose-6-phosphate isomerase from Francisella tularensis.
Osipiuk, J., Maltseva, N., Hasseman, J., Anderson, W.F., Joachimiak, A.To be published.
3LJK
Glucose-6-phosphate isomerase from Francisella tularensis.
- PDB DOI: https://doi.org/10.2210/pdb3LJK/pdb
- Classification: ISOMERASE
- Organism(s): Francisella tularensis subsp. tularensis
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2010-01-26 Released: 2010-03-16
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.48 Å
- R-Value Free: 0.158
- R-Value Work: 0.124
- R-Value Observed: 0.126
wwPDB Validation 3D Report Full Report
This is version 1.5 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Glucose-6-phosphate isomerase | 543 | Francisella tularensis subsp. tularensis | Mutation(s): 1 Gene Names: FTT1315c, pgi EC: 5.3.1.9 |  | |
UniProt | |||||
Find proteins for Q5NFC4 (Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)) Explore Q5NFC4 Go to UniProtKB: Q5NFC4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5NFC4 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MES Query on MES | B [auth A] | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID C6 H13 N O4 S SXGZJKUKBWWHRA-UHFFFAOYSA-N |  | ||
| GOL Query on GOL | C [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| IPA Query on IPA | D [auth A] | ISOPROPYL ALCOHOL C3 H8 O KFZMGEQAYNKOFK-UHFFFAOYSA-N |  | ||
| CA Query on CA | E [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.48 Å
- R-Value Free: 0.158
- R-Value Work: 0.124
- R-Value Observed: 0.126
- Space Group: P 32 2 1
- Diffraction Data: https://doi.org/10.18430/m33ljk
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 115.064 | α = 90 |
| b = 115.064 | β = 90 |
| c = 84.455 | γ = 120 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| SBC-Collect | data collection |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| SHELXD | phasing |
| MLPHARE | phasing |
| DM | phasing |
| SOLVE | phasing |
| RESOLVE | phasing |
| HKL-3000 | phasing |
Entry History
Deposition Data
- Released Date: 2010-03-16 Deposition Author(s): Osipiuk, J., Maltseva, N., Hasseman, J., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Genomics of Infectious Diseases (CSGID)
Revision History (Full details and data files)
- Version 1.0: 2010-03-16
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-11-01
Changes: Refinement description - Version 1.3: 2018-01-24
Changes: Structure summary - Version 1.4: 2021-10-13
Changes: Database references, Derived calculations - Version 1.5: 2024-11-06
Changes: Data collection, Structure summary
