Download MendeleyDihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase from Yersinia pestis
Osipiuk, J., Maltseva, N., Makowska-Grzyska, M., Papazisi, L., Anderson, W.F., Joachimiak, A.To be published.
3R2E
Dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase from Yersinia pestis.
- PDB DOI: https://doi.org/10.2210/pdb3R2E/pdb
- Classification: LYASE
- Organism(s): Yersinia pestis
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2011-03-14 Released: 2011-03-23
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.15 Å
- R-Value Free: 0.255
- R-Value Work: 0.215
- R-Value Observed: 0.217
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Dihydroneopterin aldolase | 143 | Yersinia pestis | Mutation(s): 0 Gene Names: folB, YPO0648 EC: 4.1.2.25 |  | |
UniProt | |||||
Find proteins for A0A5P8YJX5 (Yersinia pestis) Explore A0A5P8YJX5 Go to UniProtKB: A0A5P8YJX5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A5P8YJX5 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.15 Å
- R-Value Free: 0.255
- R-Value Work: 0.215
- R-Value Observed: 0.217
- Space Group: I 4 2 2
- Diffraction Data: https://doi.org/10.18430/m33r2e
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 71.716 | α = 90 |
| b = 71.716 | β = 90 |
| c = 107.629 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| SBC-Collect | data collection |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| MOLREP | phasing |
| HKL-3000 | phasing |
Entry History
Deposition Data
- Released Date: 2011-03-23 Deposition Author(s): Osipiuk, J., Maltseva, N., Makowska-Grzyska, M., Papazisi, L., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
Revision History (Full details and data files)
- Version 1.0: 2011-03-23
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-11-08
Changes: Refinement description - Version 1.3: 2023-09-13
Changes: Data collection, Database references, Refinement description
