X-ray analysis of Lead(II) binding to Haloferax volcanii Malate Synthase
Adams, M.J., Howard, B.R.(2016) The Journal Of The Utah Academy 93: 77-96
Experimental Data Snapshot
Starting Model: experimental
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(2016) The Journal Of The Utah Academy 93: 77-96
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Malate synthase | 433 | Haloferax volcanii DS2 | Mutation(s): 0  Gene Names: aceB, aceB1, HVO_1983, C498_05196 EC: 2.3.3.9 | ||
UniProt | |||||
Find proteins for D4GTL2 (Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)) Explore D4GTL2  Go to UniProtKB:  D4GTL2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | D4GTL2 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 6 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PB Query on PB | F [auth A], G [auth A], H [auth A], I [auth A] | LEAD (II) ION Pb RVPVRDXYQKGNMQ-UHFFFAOYSA-N | |||
GLV Query on GLV | C [auth A], D [auth A], E [auth A] | GLYOXYLIC ACID C2 H2 O3 HHLFWLYXYJOTON-UHFFFAOYSA-N | |||
ACT Query on ACT | B [auth A] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
K Query on K | J [auth A], K [auth A], L [auth A] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N | |||
CL Query on CL | M [auth A], N [auth A], O [auth A], P [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | |||
NA Query on NA | Q [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 155.353 | α = 90 |
b = 155.353 | β = 90 |
c = 139.412 | γ = 120 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
HKL-2000 | data scaling |
PHASER | phasing |
PDB_EXTRACT | data extraction |
HKL-2000 | data reduction |
PHASER | phasing |