Structure of PLP internal aldimine form of Sphingopyxis sp. MTA144 FumI protein
Campopiano, D.J., Serpico, A., Marles-Wright, J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Aminopentol aminotransferase | 440 | Sphingopyxis macrogoltabida | Mutation(s): 0  Gene Names: fumI EC: 2.6.1 | ||
UniProt | |||||
Find proteins for D2D3B2 (Sphingopyxis macrogoltabida) Explore D2D3B2  Go to UniProtKB:  D2D3B2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | D2D3B2 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PMP Query on PMP | D [auth A], G [auth B] | 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE C8 H13 N2 O5 P ZMJGSOSNSPKHNH-UHFFFAOYSA-N | |||
PLP Query on PLP | C [auth A], F [auth B] | PYRIDOXAL-5'-PHOSPHATE C8 H10 N O6 P NGVDGCNFYWLIFO-UHFFFAOYSA-N | |||
MG Query on MG | E [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 63.254 | α = 90 |
b = 103.903 | β = 109.61 |
c = 65.326 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |