Crystal Structure of Dihydropteroate synthase from Mycobacterium smegmatis with bound 6-hydroxymethylpterin-monophosphate
Bolejack, M.J., Dranow, D.M., Lorimer, D.D., Horanyi, P.S., Edwards, T.E.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Dihydropteroate synthase | 293 | Mycolicibacterium smegmatis MKD8 | Mutation(s): 1  Gene Names: D806_059810 EC: 2.5.1.15 | ||
UniProt | |||||
Find proteins for A0A2U9PYL8 (Mycolicibacterium smegmatis (strain MKD8)) Explore A0A2U9PYL8  Go to UniProtKB:  A0A2U9PYL8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A2U9PYL8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PMM Query on PMM | D [auth A] | PTERIN-6-YL-METHYL-MONOPHOSPHATE C7 H8 N5 O5 P AJXFJEHKGGCFNM-UHFFFAOYSA-N | |||
CIT Query on CIT | B [auth A], E [auth A] | CITRIC ACID C6 H8 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-N | |||
DMS Query on DMS | C [auth A] | DIMETHYL SULFOXIDE C2 H6 O S IAZDPXIOMUYVGZ-UHFFFAOYSA-N | |||
EDO Query on EDO | F [auth A] G [auth A] H [auth A] I [auth A] J [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 47.72 | α = 90 |
b = 96.41 | β = 90 |
c = 135.07 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XSCALE | data scaling |
PDB_EXTRACT | data extraction |
MoRDa | phasing |