Download MendeleyHuman Bisphosphoglycerate Mutase complexed with 2-phosphoglycolate
Clark, K.L., Kulathila, R., Wright, K., Isome, Y., Sage, D., Yang, Y., Christodoulou, C.To be published.
7THI
Human Bisphosphoglycerate Mutase complexed with 2-phosphoglycolate
- PDB DOI: https://doi.org/10.2210/pdb7THI/pdb
- Classification: ISOMERASE
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2022-01-11 Released: 2022-01-26
- Funding Organization(s): Not funded
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.33 Å
- R-Value Free: 0.160
- R-Value Work: 0.134
- R-Value Observed: 0.136
Starting Model: experimental
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This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Bisphosphoglycerate mutase | 267 | Homo sapiens | Mutation(s): 0 Gene Names: BPGM EC: 5.4.2.4 (PDB Primary Data), 5.4.2.11 (PDB Primary Data) |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P07738 (Homo sapiens) Explore P07738 Go to UniProtKB: P07738 | |||||
PHAROS: P07738 GTEx: ENSG00000172331 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P07738 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PGA (Subject of Investigation/LOI) Query on PGA | C [auth A], D [auth B] | 2-PHOSPHOGLYCOLIC ACID C2 H5 O6 P ASCFNMCAHFUBCO-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.33 Å
- R-Value Free: 0.160
- R-Value Work: 0.134
- R-Value Observed: 0.136
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 48.607 | α = 90 |
| b = 71.758 | β = 90 |
| c = 159.294 | γ = 90 |
| Software Name | Purpose |
|---|---|
| Aimless | data scaling |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| autoPROC | data reduction |
| PHENIX | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2022-01-26 Deposition Author(s): Clark, K.L., Kulathila, R., Wright, K., Isome, Y., Sage, D., Yang, Y., Christodoulou, C.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Not funded | -- |
Revision History (Full details and data files)
- Version 1.0: 2022-01-26
Type: Initial release - Version 1.1: 2023-10-18
Changes: Data collection, Refinement description
