Ligand validation:2ODE

GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 2ODE designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2ODE_GDP_C_1002	97%	45%	0.064	0.979	1.12	0.99	2	2	0	0	100%	1
2ODE_GDP_A_1001	91%	41%	0.084	0.969	1.06	1.22	2	4	0	0	100%	1
2IHB_GDP_A_356	93%	49%	0.092	0.988	0.88	1.1	1	4	0	0	100%	1
4G5O_GDP_C_401	79%	44%	0.141	0.989	0.98	1.18	2	2	1	0	100%	1
2V4Z_GDP_A_1348	66%	47%	0.18	0.987	0.93	1.11	1	4	0	0	100%	1
4G5S_GDP_C_401	60%	48%	0.179	0.967	0.94	1.08	1	1	2	0	100%	1
4G5R_GDP_A_401	55%	43%	0.204	0.973	0.89	1.31	1	4	2	0	100%	1
1RRG_GDP_A_183	100%	17%	0.036	0.997	2.05	1.56	7	3	0	0	100%	1
2CXX_GDP_B_2401	100%	29%	0.031	0.989	1.26	1.57	1	3	0	0	100%	1
4LUC_GDP_A_204	100%	40%	0.036	0.992	1.22	1.11	2	2	0	0	100%	1
5YMX_GDP_A_301	100%	54%	0.038	0.994	0.92	0.85	1	-	2	0	100%	1
4PZZ_GDP_A_201	100%	54%	0.035	0.989	0.92	0.86	1	1	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.