NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE
NAD is a Ligand Of Interest in 3GD4 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3GD4_NAD_A_700 | 80% | 21% | 0.113 | 0.963 | 1.72 | 1.6 | 5 | 9 | 5 | 0 | 100% | 1 |
3GD4_NAD_B_700 | 43% | 21% | 0.182 | 0.905 | 1.66 | 1.68 | 4 | 9 | 7 | 0 | 100% | 1 |
4BUR_NAD_B_700 | 63% | 18% | 0.188 | 0.985 | 1.87 | 1.7 | 9 | 5 | 1 | 0 | 100% | 1 |
5MIV_NAD_C_701 | 58% | 42% | 0.171 | 0.952 | 0.93 | 1.29 | 1 | 5 | 8 | 0 | 100% | 1 |
8QNS_NAD_D_702 | 31% | 59% | 0.275 | 0.944 | 0.74 | 0.82 | 1 | 2 | 3 | 0 | 100% | 1 |
3CMC_NAD_R_408 | 100% | 20% | 0.016 | 0.998 | 1.63 | 1.74 | 4 | 9 | 0 | 0 | 100% | 1 |
3EC7_NAD_A_400 | 100% | 18% | 0.025 | 0.995 | 1.8 | 1.74 | 5 | 8 | 1 | 0 | 100% | 1 |
4URF_NAD_A_1249 | 100% | 44% | 0.034 | 0.995 | 0.96 | 1.2 | 2 | 4 | 0 | 0 | 100% | 1 |
2C5A_NAD_B_1374 | 100% | 23% | 0.039 | 0.992 | 1.34 | 1.84 | 6 | 7 | 1 | 0 | 100% | 1 |
1HET_NAD_A_402 | 100% | 10% | 0.043 | 0.994 | 2.25 | 2.1 | 9 | 8 | 0 | 0 | 100% | 0.9068 |