PEF: DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
PEF is a Ligand Of Interest in 5Y5S designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5Y5S_PEF_M_410 | 40% | 15% | 0.106 | 0.978 | 2.37 | 1.39 | 1 | 1 | 0 | 0 | 11% | 10.639999999999999 |
5Y5S_PEF_M_418 | 31% | 47% | 0.245 | 0.913 | 0.96 | 1.07 | 2 | 3 | 3 | 0 | 100% | 1 |
5Y5S_PEF_M_408 | 28% | 26% | 0.094 | 0.903 | 1.84 | 1.18 | 2 | 1 | 0 | 0 | 11% | 10.639999999999999 |
5Y5S_PEF_I_103 | 27% | 9% | 0.119 | 0.923 | 2.62 | 1.81 | 2 | 2 | 1 | 0 | 11% | 10.639999999999999 |
5Y5S_PEF_W_103 | 19% | 9% | 0.113 | 0.87 | 2.64 | 1.82 | 2 | 2 | 0 | 0 | 11% | 10.639999999999999 |
5Y5S_PEF_1_104 | 12% | 9% | 0.152 | 0.836 | 2.71 | 1.81 | 2 | 2 | 0 | 0 | 11% | 10.639999999999999 |
5Y5S_PEF_U_104 | 11% | 10% | 0.179 | 0.855 | 2.53 | 1.85 | 2 | 2 | 0 | 0 | 11% | 10.639999999999999 |
5Y5S_PEF_5_103 | 10% | 9% | 0.155 | 0.824 | 2.63 | 1.79 | 2 | 2 | 1 | 0 | 11% | 10.639999999999999 |
5Y5S_PEF_K_104 | 9% | 32% | 0.275 | 0.839 | 1.25 | 1.45 | 2 | 4 | 1 | 0 | 57% | 0.5745 |
5Y5S_PEF_U_105 | 5% | 9% | 0.153 | 0.718 | 2.65 | 1.84 | 2 | 2 | 0 | 0 | 11% | 10.639999999999999 |
5Y5S_PEF_M_409 | 5% | 9% | 0.247 | 0.813 | 2.65 | 1.84 | 2 | 2 | 0 | 0 | 11% | 10.639999999999999 |
5Y5S_PEF_3_103 | 3% | 9% | 0.18 | 0.669 | 2.62 | 1.88 | 2 | 2 | 0 | 0 | 11% | 10.639999999999999 |
5Y5S_PEF_M_407 | 3% | 9% | 0.154 | 0.641 | 2.62 | 1.82 | 2 | 2 | 0 | 0 | 11% | 10.639999999999999 |
5B5N_PEF_M_407 | 25% | 44% | 0.159 | 0.912 | 1.06 | 1.12 | 1 | 1 | 0 | 0 | 34% | 0.3404 |
5B5M_PEF_x_306 | 21% | 24% | 0.185 | 0.902 | 1.72 | 1.41 | 2 | 3 | 0 | 0 | 40% | 0.4043 |
7C52_PEF_M_408 | 21% | 26% | 0.175 | 0.945 | 1.71 | 1.28 | 2 | 1 | 0 | 0 | 11% | 10.639999999999999 |
4V8K_PEF_AM_408 | 12% | 12% | 0.235 | 0.89 | 2.93 | 1.16 | 5 | 1 | 5 | 0 | 30% | 0.2979 |
3WMM_PEF_H_301 | 8% | 6% | 0.314 | 0.893 | 3.12 | 1.96 | 7 | 5 | 18 | 0 | 40% | 0.4043 |
1ZDT_PEF_A_1001 | 72% | 48% | 0.131 | 0.955 | 1.05 | 0.98 | 4 | 3 | 2 | 0 | 100% | 1 |
5Z1N_PEF_A_401 | 57% | 50% | 0.152 | 0.928 | 0.95 | 0.99 | 2 | 3 | 2 | 0 | 100% | 0.9681 |
4RHP_PEF_A_401 | 35% | 26% | 0.178 | 0.924 | 1.69 | 1.33 | 6 | 4 | 0 | 0 | 68% | 0.6809 |
2QGU_PEF_A_301 | 29% | 45% | 0.161 | 0.82 | 1.03 | 1.1 | 4 | 3 | 0 | 0 | 100% | 1 |
6AWL_PEF_A_401 | 28% | 42% | 0.136 | 0.842 | 1.15 | 1.12 | 4 | 2 | 0 | 0 | 68% | 0.6809 |