Download MendeleyPseudomonas aeruginosa 6-pyruvoyl tetrahydrobiopterin synthase
McGrath, T.E., Kisselman, G., Battaile, K., Romanov, V., Wu-Brown, J., Guthrie, J., Virag, C., Mansoury, K., Edwards, A.M., Pai, E.F., Chirgadze, N.Y.To be published.
2OBA
Pseudomonas aeruginosa 6-pyruvoyl tetrahydrobiopterin synthase
- PDB DOI: https://doi.org/10.2210/pdb2OBA/pdb
- Classification: LYASE
- Organism(s): Pseudomonas aeruginosa
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2006-12-18 Released: 2007-01-30
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.33 Å
- R-Value Free: 0.256
- R-Value Work: 0.186
- R-Value Observed: 0.189
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.6 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Probable 6-pyruvoyl tetrahydrobiopterin synthase | 138 | Pseudomonas aeruginosa | Mutation(s): 0 Gene Names: PA2666 EC: 4.2.3.12 (PDB Primary Data), 4 (UniProt) |  | |
UniProt | |||||
Find proteins for Q9I0H2 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9I0H2 Go to UniProtKB: Q9I0H2 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9I0H2 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ZN Query on ZN | G [auth A] H [auth B] I [auth C] J [auth D] K [auth E] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D, E A, B, C, D, E, F | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.33 Å
- R-Value Free: 0.256
- R-Value Work: 0.186
- R-Value Observed: 0.189
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 76.082 | α = 90 |
| b = 87.521 | β = 90 |
| c = 124.67 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| JDirector | data collection |
| HKL-2000 | data reduction |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2007-01-30 Deposition Author(s): McGrath, T.E., Kisselman, G., Battaile, K., Romanov, V., Wu-Brown, J., Guthrie, J., Virag, C., Mansoury, K., Edwards, A.M., Pai, E.F., Chirgadze, N.Y.
Revision History (Full details and data files)
- Version 1.0: 2007-01-30
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Advisory, Version format compliance - Version 1.3: 2017-10-18
Changes: Refinement description - Version 1.4: 2023-08-30
Changes: Data collection, Database references, Derived calculations, Refinement description - Version 1.5: 2023-11-15
Changes: Data collection - Version 1.6: 2024-11-20
Changes: Structure summary
