Download MendeleyCrystal structure of a putative glycoside hydrolase family protein from Bacillus halodurans.
Sugadev, R., Burley, S.K., Swaminathan, S.To be published.
2RDY
Crystal structure of a putative glycoside hydrolase family protein from Bacillus halodurans
- PDB DOI: https://doi.org/10.2210/pdb2RDY/pdb
- Classification: HYDROLASE
- Organism(s): Halalkalibacterium halodurans C-125
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2007-09-25 Released: 2007-10-09
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.03 Å
- R-Value Free: 0.225
- R-Value Work: 0.198
- R-Value Observed: 0.198
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| BH0842 protein | 803 | Halalkalibacterium halodurans C-125 | Mutation(s): 0 Gene Names: BH0842 |  | |
UniProt | |||||
Find proteins for Q9KEL0 (Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)) Explore Q9KEL0 Go to UniProtKB: Q9KEL0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9KEL0 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.03 Å
- R-Value Free: 0.225
- R-Value Work: 0.198
- R-Value Observed: 0.198
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 75.61 | α = 90 |
| b = 149.071 | β = 90 |
| c = 164.399 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| CBASS | data collection |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| SHELXD | phasing |
| SHARP | phasing |
| WARP | model building |
Entry History
Deposition Data
- Released Date: 2007-10-09 Deposition Author(s): Sugadev, R., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2007-10-09
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2021-02-03
Changes: Database references, Derived calculations, Structure summary - Version 1.3: 2024-11-06
Changes: Data collection, Database references, Structure summary
