Download MendeleyCrystal structure of the CRISPR-associated protein SSO1393 from Sulfolobus solfataricus
Petit, P., Xu, X., Beloglazova, N., Brown, G., Savchenko, A., Yakunin, A.F.To be published.
3QYF
Crystal structure of the CRISPR-associated protein SSO1393 from Sulfolobus solfataricus
- PDB DOI: https://doi.org/10.2210/pdb3QYF/pdb
- Classification: ANTIVIRAL PROTEIN
- Organism(s): Saccharolobus solfataricus
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2011-03-03 Released: 2011-03-23
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.207
- R-Value Work: 0.168
- R-Value Observed: 0.170
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| CRISPR-ASSOCIATED PROTEIN | 324 | Saccharolobus solfataricus | Mutation(s): 0 Gene Names: SSO1393 EC: 4.6.1 |  | |
UniProt | |||||
Find proteins for Q97YD2 (Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)) Explore Q97YD2 Go to UniProtKB: Q97YD2 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q97YD2 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | C [auth A], D [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.207
- R-Value Work: 0.168
- R-Value Observed: 0.170
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 120.614 | α = 90 |
| b = 81.554 | β = 108.3 |
| c = 70.155 | γ = 90 |
| Software Name | Purpose |
|---|---|
| ADSC | data collection |
| SOLVE | phasing |
| PHENIX | refinement |
| XDS | data reduction |
| SCALA | data scaling |
Entry History
Deposition Data
- Released Date: 2011-03-23 Deposition Author(s): Petit, P., Xu, X., Chang, C., Savchenko, A., Yakunin, A.F.
Revision History (Full details and data files)
- Version 1.0: 2011-03-23
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2018-01-24
Changes: Structure summary
