Dioclea megacarpa lectin (DmegA) complexed with X-Man
Oliveira, M.V., De Sloover, G., Osterne, V.J.S., Pinto-Junior, V.R., Sacramento-Neto, J.C., Van Damme, E.J.M., Nascimento, K.S., Cavada, B.S.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Dioclea megacarpa lectin | 237 | Macropsychanthus megacarpus | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for B3EWJ2 (Macropsychanthus sclerocarpus) Explore B3EWJ2  Go to UniProtKB:  B3EWJ2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | B3EWJ2 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
XMM (Subject of Investigation/LOI) Query on XMM | E [auth A], I [auth B] | 5-bromo-4-chloro-1H-indol-3-yl alpha-D-mannopyranoside C14 H15 Br Cl N O6 OPIFSICVWOWJMJ-HAAGFXOZSA-N | |||
GOL Query on GOL | F [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
MN (Subject of Investigation/LOI) Query on MN | C [auth A], G [auth B] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N | |||
CA (Subject of Investigation/LOI) Query on CA | D [auth A], H [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
K Query on K | J [auth B] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 89.35 | α = 90 |
b = 109.414 | β = 90 |
c = 126.364 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
MOSFLM | data reduction |
SCALA | data scaling |
MOLREP | phasing |
Coot | model building |
Funding Organization | Location | Grant Number |
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Coordination for the Improvement of Higher Education Personnel | Brazil | -- |
Brazilian National Council for Scientific and Technological Development (CNPq) | Brazil | -- |
Research Foundation - Flanders (FWO) | Belgium | 12T4622N |