Time-stamped Copies of PDB Archive Available via FTP

01/12

A snapshot of the PDB archive (ftp.wwpdb.org) as of January 4, 2010 has been added to ftp://snapshots.wwpdb.org/. Snapshots of the PDB have been archived annually since 2004. It is hoped that these snapshots will provide readily identifiable data sets for research on the PDB archive.

The directory 20100104 includes the 62,388 experimentally-determined coordinate files and related experimental data that were available at that time. Coordinate data are available in PDB, mmCIF, and XML formats. The date and time stamp of each file indicates the last time the file was modified.

The script at ftp://snapshots.wwpdb.org/rsyncSnapshots.sh may be used to make a local copy of a snapshot or sections of the snapshot..

News Index

• 12/28 Happy Holidays

• 12/21 Deposition Session Restart IDs

• 12/14 Annual Report Published

• 12/07 Poster Prize Awarded at AsCA

• 12/07 Latest Website Release

• 11/30 Learn About Viruses

• 11/30 New and Improved Web Services for Accessing PDB Data

• 11/23 New Ligand Summary Pages

• 11/16 Explore Search Results Using Data Distribution Summaries

• 11/09 Creating Tabular Reports

• 11/02 PDBMobile

• 10/26 Newsletter Published

• 10/19 Binding Affinity Data Integrated with RCSB PDB

• 10/12 Categorized View of Molecule of the Month

• 10/05 Latest Website Release

• 09/28 Poster Prize Awarded at ECM

• 09/28 Analyze small molecule interactions in the PDB with Ligand Explorer

• 09/21 Redesigned BioSync

• 09/14 Exploring Search Results

• 09/07 Tools for Education

• 08/31 Newsletter Published

• 08/24 New Flyers Available

• 08/24 Poster Prize Awarded at ACA

• 08/17 Upcoming Meeting: PDB Symposium at ACS

• 08/10 wwPDB News: Validation Report PDFs

• 08/10 ADIT 2.0 Offers Improved Deposition Process

• 08/03 Poster Prize Awarded at ISMB

• 07/27 Looking at Structures: A Resource for Learning About PDB Data

• 07/27 Paper Published

• 07/20 Upcoming Meeting: ACA

• 07/20 New Release of pdb_extract Available Online and for Download

• 07/13 Get the Latest wwPDB News

• 07/06 Improved Version of ADIT Available

• 07/06 ISMB and 3DSIG Meetings

• 06/29 Version 2 NMR Restraint Files Available from the wwPDB FTP

• 06/29 Use Ligand Expo When Depositing Structures with Ligands

• 06/22 Latest Structures Widget

• 06/15 Papers published

• 06/08 Improved Version of ADIT Available, Transitional Implementation Starts June 14

• 06/08 New Website Features

• 06/01 Create a Collage of Structures

• 05/25 Search the RCSB PDB in Your Web Browser

• 05/18 Turn Your Computer into a PDB Structure Kiosk

• 05/11 New Website Features and Widgets

• 05/04 Version 2 NMR Restraint Files to be Released in the wwPDB FTP on June 30, 2010

• 05/04 wwPDB To Provide Validation Reports as PDFs

• 04/27 Newsletter Published

• 04/20 Screencasts Demonstrate RCSB PDB Features

• 04/20 DNA Day: April 23

• 04/13 Come build virus models at Rutgers Day (April 24)

• 04/13 Exhibiting at Experimental Biology (April 24-28)

• 04/06 Bookmark and Share RCSB PDB Webpages

• 03/30 Advanced Search: Sequence Motif

• 03/23 West Windsor Plainsboro High School North Wins New Jersey Science Olympiad Protein Modeling State Finals

• 03/23 San Diego Science Festival Expo Day: March 27

• 03/16 Exhibiting at NSTA

• 03/09 Improved Ligand Searching

• 03/02 New Website Features

• 02/23 Changes to the wwPDB Policy for Depositing Polypeptide Structures

• 02/23 Online Narrated Tutorial Demonstrates How to Use the RCSB PDB

• 02/16 Exhibition at the Biophysical Society Meeting

• 02/09 Poster Download: How Do Drugs Work?

• 02/02 wwPDB FTP Advisory Notice

• 02/02 Newsletter Published

• 01/26 Comparison Tool for Exploring Sequence and Structure Alignments

• 01/19 NJ Science Olympiad Protein Modeling Results

• 01/12 Time-stamped Copies of PDB Archive Available via FTP

• 01/05 2009 Annual Report Published