Create High Resolution Images

06/18

(Click image to enlarge)
Image of a heme in hemoglobin structure 4hhb created with Ligand Explorer.

(Click image to enlarge)
Image from the Molecule of the Month article on Transfer-Messenger RNA.

Create or download publication-quality pictures of biomacromolecules with the RCSB PDB.

Several interactive, Java-based tools¹ can be used to visualize PDB data and create pictures.  Protein Workshop offers easily customized views; Simple Viewer utilizes a quick ribbon display; and Ligand Explorer visualizes the interactions of bound ligands in protein and nucleic acids structures.

Each program can be used to create and save high-resolution images in JPEG, PNG, and TIFF formats. Using the Save Image dialog box from the File menu, users can specify the width and height of an image in pixels, inches, or millimeters.

From the educational PDB-101 site, high resolution TIFFs of Molecule of the Month illustrations can be downloaded and used in presentations and publications. The high resolution files are linked from each article, and available as an archive.

PDB-101 posters, including The Structural Biology of HIV and Molecular Machinery: A Tour of the Protein Data Bank, can be saved as high or low resolution PDFs.

Citation and usage information can be found here. 

¹J.L. Moreland, A.Gramada, O.V. Buzko, Q. Zhang and P.E. Bourne (2005) The Molecular Biology Toolkit (MBT): A modular platform for developing molecular visualization applications BMC Bioinformatics 6:21.  

News Index

• 12/31 Happy International Year of Crystallography

• 12/24 Annual Report Published

• 12/17 Paper Published

• 12/10 Quick Tour of Search Results

• 12/03 World AIDS Day Symposium

• 11/26 Browse Membrane Transport Proteins

• 11/19 Help Desk Questions and Answers

• 11/12 Upcoming Meeting: ABRCMS

• 11/05 Comparison Tool for Exploring Sequence and Structure Alignments

• 10/29 Find Structures Using the Protein Symmetry Browser

• 10/22 Fall Newsletter Published

• 10/15 Search by Gene Name

• 10/08 Find Drugs in the PDB

• 10/08 Retirement of SOAP Services

• 10/01 New PDB-101 Animation

• 09/24 wwPDB Public Symposium

• 09/24 Workshop on Theoretical Model Validation and PDBx/mmCIF Data Exchange Format

• 09/24 Beta #11 of the RCSB PDB Mobile Android App is Available

• 09/17 wwPDB Public Symposium

• 09/17 Improved Searching with New Sequence Identity Cutoff

• 09/10 Poster Prize Awarded at ECM

• 09/10 New Website Release

• 09/03 Head Back to School with PDB-101

• 08/27 Map PDB Structures to Full-length Protein Sequences

• 08/20 Join the RCSB PDB Team

• 08/20 Poster Prize Awarded at ISGO

• 08/20 Explore Gallery View of Search Results

• 08/13 Poster Prize Awarded at ACA, ISMB

• 08/13 NOTICE: RCSB PDB Deposition Service Interruption

• 08/06 Ligand Reports

• 07/30 Smart Searching with the Top Bar Suggestion Box

• 07/23 Upcoming Meeting: ICSG2013-SLS

• 07/23 Beta version #4 of RCSB PDB Mobile for Android

• 07/23 Join the RCSB PDB Team

• 07/16 Upcoming Meetings: ACA & ISMB/ECCB

• 07/09 Spring Newsletter Published

• 07/09 Beta version #3 of RCSB PDB Mobile for Android

• 07/02 Build 3D Paper Models at PDB-101

• 06/25 Keep Up-to-Date with the RCSB PDB

• 06/18 Create High Resolution Images

• 06/11 Search the PDB Using Drill-down Pie Charts

• 06/11 New Paper: Trendspotting in the PDB

• 06/04 Map PDB Structures to Full-length Protein Sequences

• 05/28 Browse the Anatomical Therapeutic Chemical Classification System to Find Structures

• 05/21 Web Services for Accessing PDB Data

• 05/14 Personalize the RCSB PDB

• 05/07 New PDB-101 Features

• 04/30 Updated Version of MAXIT Available

• 04/23 Rutgers Day (April 27)

• 04/23 Beta Test RCSB PDB Mobile for Android

• 04/23 DNA Day 2013: April 25

• 04/16 Upcoming Meeting: Experimental Biology and ASBMB

• 04/09 Visit the RCSB PDB at NSTA

• 04/09 Spring Newsletter Published

• 04/02 Search, View Annotations, and Visualize Peptide-like Antibiotic and Inhibitor Molecules

• 03/26 3D Visualization of Protein Symmetry

• 03/19 Distribution of PDB Data by Protein Stoichiometry and Symmetry

• 03/19 Visit the San Diego Festival of Science and Engineering on March 23

• 03/12 Access Drugs and Drug Targets in the PDB

• 03/05 New Website Release

• 02/26 Browse the PDB by GO Terms, EC Number, Source Organism, and More

• 02/19 Build complex queries with Advanced Search

• 02/12 Poster Prize Awarded at AsCA

• 02/05 Author Profiles: Timeline Display of a Researcher's Structures

• 02/05 News Reader Survey

• 01/29 Join the RCSB PDB Team

• 01/29 Visit the Biomolecular Discovery Dome at Biophysical Society

• 01/22 Revision History Widget

• 01/22 Portable Molecules (of the Month)

• 01/15 Quick Tour of Search Results

• 01/08 News Reader Survey

• 01/08 Winter Newsletter Published

• 01/01 Annual Report Published