Paper Published

12/17

A new paper has been published that describes the module used to process chemical components in deposited PDB entries as part of the new wwPDB Common Deposition and Annotation System:

J.Y. Young, Z. Feng, D. Dimitropoulos, R. Sala, J. Westbrook, M. Zhuravleva, C. Shao, M. Quesada, E. Peisach, H.M. Berman. (2013) Chemical annotation of small and peptide-like molecules at the Protein Data Bank. Database 2013: bat079.

This new system is currently in testing. For more information, see wwpdb.org.

News Index

• 12/31 Happy International Year of Crystallography

• 12/24 Annual Report Published

• 12/17 Paper Published

• 12/10 Quick Tour of Search Results

• 12/03 World AIDS Day Symposium

• 11/26 Browse Membrane Transport Proteins

• 11/19 Help Desk Questions and Answers

• 11/12 Upcoming Meeting: ABRCMS

• 11/05 Comparison Tool for Exploring Sequence and Structure Alignments

• 10/29 Find Structures Using the Protein Symmetry Browser

• 10/22 Fall Newsletter Published

• 10/15 Search by Gene Name

• 10/08 Retirement of SOAP Services

• 10/08 Find Drugs in the PDB

• 10/01 New PDB-101 Animation

• 09/24 wwPDB Public Symposium

• 09/24 Workshop on Theoretical Model Validation and PDBx/mmCIF Data Exchange Format

• 09/24 Beta #11 of the RCSB PDB Mobile Android App is Available

• 09/17 wwPDB Public Symposium

• 09/17 Improved Searching with New Sequence Identity Cutoff

• 09/10 Poster Prize Awarded at ECM

• 09/10 New Website Release

• 09/03 Head Back to School with PDB-101

• 08/27 Map PDB Structures to Full-length Protein Sequences

• 08/20 Explore Gallery View of Search Results

• 08/20 Poster Prize Awarded at ISGO

• 08/20 Join the RCSB PDB Team

• 08/13 Poster Prize Awarded at ACA, ISMB

• 08/13 NOTICE: RCSB PDB Deposition Service Interruption

• 08/06 Ligand Reports

• 07/30 Smart Searching with the Top Bar Suggestion Box

• 07/23 Beta version #4 of RCSB PDB Mobile for Android

• 07/23 Join the RCSB PDB Team

• 07/23 Upcoming Meeting: ICSG2013-SLS

• 07/16 Upcoming Meetings: ACA & ISMB/ECCB

• 07/09 Beta version #3 of RCSB PDB Mobile for Android

• 07/09 Spring Newsletter Published

• 07/02 Build 3D Paper Models at PDB-101

• 06/25 Keep Up-to-Date with the RCSB PDB

• 06/18 Create High Resolution Images

• 06/11 New Paper: Trendspotting in the PDB

• 06/11 Search the PDB Using Drill-down Pie Charts

• 06/04 Map PDB Structures to Full-length Protein Sequences

• 05/28 Browse the Anatomical Therapeutic Chemical Classification System to Find Structures

• 05/21 Web Services for Accessing PDB Data

• 05/14 Personalize the RCSB PDB

• 05/07 New PDB-101 Features

• 04/30 Updated Version of MAXIT Available

• 04/23 Beta Test RCSB PDB Mobile for Android

• 04/23 DNA Day 2013: April 25

• 04/23 Rutgers Day (April 27)

• 04/16 Upcoming Meeting: Experimental Biology and ASBMB

• 04/09 Spring Newsletter Published

• 04/09 Visit the RCSB PDB at NSTA

• 04/02 Search, View Annotations, and Visualize Peptide-like Antibiotic and Inhibitor Molecules

• 03/26 3D Visualization of Protein Symmetry

• 03/19 Distribution of PDB Data by Protein Stoichiometry and Symmetry

• 03/19 Visit the San Diego Festival of Science and Engineering on March 23

• 03/12 Access Drugs and Drug Targets in the PDB

• 03/05 New Website Release

• 02/26 Browse the PDB by GO Terms, EC Number, Source Organism, and More

• 02/19 Build complex queries with Advanced Search

• 02/12 Poster Prize Awarded at AsCA

• 02/05 News Reader Survey

• 02/05 Author Profiles: Timeline Display of a Researcher's Structures

• 01/29 Join the RCSB PDB Team

• 01/29 Visit the Biomolecular Discovery Dome at Biophysical Society

• 01/22 Revision History Widget

• 01/22 Portable Molecules (of the Month)

• 01/15 Quick Tour of Search Results

• 01/08 News Reader Survey

• 01/08 Winter Newsletter Published

• 01/01 Annual Report Published