Time-stamped Copies of the PDB Archive

01/05 

A snapshot of the PDB archive (ftp://ftp.wwpdb.org) as of January 1, 2016 has been added to ftp://snapshots.wwpdb.org/. Snapshots have been archived annually since January 2005 to provide readily identifiable data sets for research on the PDB archive.

The directory 20160101 includes the 114,679 experimentally-determined coordinate files and related experimental data available at that time. Coordinate data are available in PDB, mmCIF, and XML formats. The date and time stamp of each file indicates the last time the file was modified. The snapshot is 555 GB.

News Index

• 12/27 Season's Greetings

• 12/20 Celebrate #NationalCrosswordDay with Sequence Events

• 12/14 wwPDB News: 2016 Remediation of 3DEM Entries

• 12/04 Mobile Access to RCSB PDB

• 11/29 Cast Your Vizzies Vote For RCSB PDB

• 11/22 Visualize Structure Quality Metrics in 3D

• 11/15 PDB and RCSB PDB: Did You Know?

• 11/08 Crossword Puzzle: Sequence Events

• 11/01 Poster Prizes Awarded at 12th International Conference on Biology and Synchrotron Radiation

• 10/25 Color the Diverse 3D Shapes Studied by Crystallographers

• 10/18 Access Irving Geis' Early Molecular Images in 3D

• 10/14 wwPDB News: Remediation of 3DEM Entries in the Protein Data Bank

• 10/14 How many structures are in the PDB archive?

• 10/11 Explore Ligand Interactions in 3D

• 10/11 View Validation in 3D

• 10/11 New Images for Transmembrane Proteins

• 10/11 Improved Access to Small Molecule Information

• 10/11 Fall Newsletter Published

• 10/11 Access More Diffraction Image Data

• 10/07 Join our Development Team in San Diego

• 10/04 New Feature: Pathway View

• 09/29 wwPDB News: AutoDep, ADIT-NMR and EMDep Deposition Systems Have Been Retired, Effective September 30th 2016

• 09/27 Public Symposium: Aesthetics and the Life Sciences

• 09/19 Take the PDB-101 Survey

• 09/13 Poster Prize Awarded at ECM

• 09/06 Head Back to School with PDB-101

• 08/30 Activity: Quasisymmetry in Icosahedral Viruses

• 08/23 200 Icosahedral Viruses from the PDB

• 08/23 Access Diffraction Image Data

• 08/23 Search: Molecule of the Month, PDB-101, News

• 08/23 Mapping 3D Structures to Pathways

• 08/23 Mapping Protein Features onto 3D Structure

• 08/23 Rapid Visualization of Large Structure using NGL/MMTF

• 08/16 Color Molecular Machinery

• 08/09 Poster Prize Awarded at ACA

• 08/05 wwPDB News: wwPDB Validation Server Upgrade

• 08/02 Molecule of the Month Reaches 200

• 07/26 Poster Prize Awarded at ISMB

• 07/26 HTTPS and RCSB PDB

• 07/19 Meet the RCSB PDB at ACA

• 07/12 Summer Newsletter Published

• 07/06 wwPDB News: Announcement: Map Volume Deposition to EMDB Will Be Mandatory for PDB Depositions of 3DEM models Starting September 6th, 2016

• 07/05 Biological Assembly files for large structures

• 07/05 Explore Protein Modifications

• 07/05 New Website Features

• 06/28 2016 ISMB Conference

• 06/23 wwPDB News: Deposit ORCID and Grant Information with PDB Data

• 06/20 wwPDB News: Access to wwPDB and RCSB PDB websites

• 06/14 Award-Winning Videos about Structural Biology and Diabetes

• 06/07 Join our Development Team in San Diego

• 05/31 Vote Now!

• 05/24 wwPDB News: Improved Worldwide Support for wwPDB Deposition, Validation, and Annotation

• 05/24 Join the Sequence-Structure Hackathon at ISMB Orlando 2016

• 05/17 Contact Customer Services with Questions and Feedback

• 05/10 Video Challenge Deadline: May 29

• 05/03 wwPDB News: New NMR and 3DEM Validation Reports for Archived PDB Structures

• 05/03 Paper Published in Journal of Applied Crystallography

• 04/26 New Insulin and Diabetes Poster Available for Download

• 04/19 DNA Day 2016: April 25

• 04/14 wwPDB News: Ligand Validation Workshop Paper Published

• 04/12 Spring Newsletter Published

• 04/05 Molecular Origami: 3D model of Zika virus

• 03/30 wwPDB News: Zika Virus Structure Released

• 03/29 wwPDB News: wwPDB Deposition, Annotation, and Validation System To Support Suppression of Entry Author Lists and Titles

• 03/29 wwPDB News: AutoDep, ADIT-NMR, EMDep Deposition Systems to Be Retired, Effective September 30^th 2016

• 03/29 Paper Published in Journal of Chemical Education

• 03/22 Improving Download Services

• 03/15 wwPDB News: Updated X-ray Validation Reports for Archived PDB Structures Now Available

• 03/15 RCSB PDB Highlighted at Wellcome Image Awards

• 03/08 Visualize Electron Density Maps For Bound Ligands

• 03/03 wwPDB News: Coming Soon: New NMR and 3DEM Validation Reports for Archived PDB Structures

• 03/01 Gene View Video Tutorial

• 02/23 1 Billion Atoms

• 02/16 Search Results, Simplified.

• 02/09 2016 High School Video Challenge: Structural Biology and Diabetes

• 02/04 wwPDB News: Coming soon: Updated X-ray Validation Reports for Archived PDB Structures

• 02/02 Protein Modeling at the Science Olympiad

• 01/26 Molecular Explorations Through Biology and Medicine

• 01/19 Winter Newsletter Published

• 01/12 Deposit 3DEM, NMR, and X-ray Structures with new Deposition Tool

• 01/10 wwPDB News: wwPDB Deposition & Annotation System Now Available for NMR and 3DEM Structures

• 01/05 wwPDB News: Time-stamped Copies of the PDB Archive

• 01/05 A Year in Protein-Drug Complexes