Inclusion of Large Structures in the PDB Archive

12/09

With this week's update, large structures (containing >62 chains and/or 99999 ATOM lines) represented as single files have been fully integrated into the main PDB FTP archive in both PDBx/mmCIF and PDBML formats. Previously, large structures were represented in multiple 'SPLIT' entries, which have now been removed (obsoleted) from the PDB FTP site.

The RCSB PDB website has been updated to support these large combined files. Currently, large structures and the corresponding 'SPLIT' entries are searchable at rcsb.org by PDB ID. The associated 'SPLIT' entries will be removed from the website over the coming weeks, but will be available thereafter as obsoleted entries.

For more details please see the What's New Page.

News Index

• 12/30 Happy Holidays

• 12/23 Congratulations to 2014 Poster Prize Winners

• 12/23 ADIT To Be Retired for Depositions from X-ray Crystallography

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• 12/09 Inclusion of Large Structures in the PDB Archive

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• 11/25 ADIT To Be Retired for Depositions from X-ray Crystallography

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• 09/30 Map Structures to Sequences with Protein Feature View

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• 08/26 Announcement: Meeting on Hybrid Methods

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• 07/29 Personalize the RCSB PDB

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• 07/08 Summer Newsletter Published

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• 06/24 Depositing Data? Use the wwPDB Deposition & Annotation System

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• 05/13 Molecular Machinery Update

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• 05/06 Video Challenge for High School Students

• 04/29 New Website Release

• 04/22 DNA Day 2014: April 25

• 04/22 Visit the USA Science and Engineering Festival Expo on April 26 & 27

• 04/15 Resources for High School Video Challenge

• 04/08 Spring Newsletter Published

• 04/01 Our Best Wishes to Phil

• 04/01 Build a Model of GFP

• 03/25 The Art of Systems Biology and Nanoscience

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• 03/18 Visit the San Diego Festival of Science and Engineering on March 22

• 03/11 Meet the RCSB PDB Team

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• 03/04 Membrane Query and Annotation

• 02/25 Video Challenge for High School Students

• 02/18 Releasing Structures on Hold for Publication

• 02/11 Find PDB Structures with Protein Purification Tags

• 02/04 Tour of Ligand Deposition

• 01/28 Binding Site Visualization

• 01/21 Big Picture on Proteins

• 01/14 RapiData 2014

• 01/14 Teacher Workshop in Boulder, Colorado

• 01/07 Winter Newsletter Published